Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type i-f crispr-associated helicase cas3f | AB8809_03950 | Q6D0W9 | - | 879946 - 883254 | 124688.0 |
| type i-f crispr-associated endonuclease cas1f | AB8809_03955 | Q6D0X0 | - | 883251 - 884231 | 36171.2 |
| hypothetical protein | AB8809_03960 | Not Available | + | 886968 - 887825 | 31528.9 |
| duf1240 domain-containing protein | AB8809_03965 | Not Available | + | 887818 - 888222 | 15532.2 |
| duf1240 domain-containing protein | AB8809_03970 | Not Available | + | 888280 - 888687 | 15364.8 |
| duf1240 domain-containing protein | AB8809_03975 | Not Available | + | 888736 - 889137 | 15501.2 |
| hcp family type vi secretion system effector | AB8809_03980 | Q9HI36 | - | 889193 - 889672 | 17917.2 |
| m48 family metallopeptidase | AB8809_03985 | P42597 | - | 889790 - 890293 | 19544.6 |
| aromatic amino acid transaminase | AB8809_03990 | P04693 | - | 890377 - 891570 | 43852.3 |
| yitt family protein | AB8809_03995 | P42978 | - | 891635 - 892249 | 22239.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.