Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxide stress protein yaaa | AB8809_02945 | C6DF16 | Negative | 660514 - 661287 | 29287.0 |
| acetate uptake transporter | AB8809_03155 | P0AC99 | Negative | 692258 - 692833 | 20182.1 |
| molecular chaperone dnak | AB8809_03160 | C6DF10 | Positive | 693316 - 695223 | 68911.6 |
| molecular chaperone dnaj | AB8809_03165 | C6DF09 | Positive | 695332 - 696468 | 41158.8 |
| na+/h+ antiporter nhaa | AB8809_03170 | C6DF08 | Positive | 696755 - 697951 | 42274.7 |
| transcriptional activator nhar | AB8809_03175 | P0A9G2 | Positive | 697984 - 698904 | 34885.0 |
| 30s ribosomal protein s20 | AB8809_03180 | C6DF06 | Negative | 698982 - 699245 | 9846.16 |
| bifunctional riboflavin kinase/fad synthetase | AB8809_03185 | P0AG42 | Positive | 699671 - 700612 | 34633.1 |
| isoleucine--trna ligase | AB8809_03190 | C6DF04 | Positive | 700644 - 703457 | 104509.0 |
| signal peptidase ii | AB8809_03195 | Q8XA48 | Positive | 703454 - 703969 | 19085.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
