Pectobacterium aroidearum Ec106

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium aroidearum Ec106 is a Gram-negative bacterium characterized by the presence of flagella, which enable motility. This organism possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and survival in various environments. The genomic information for Pectobacterium aroidearum Ec106 can be accessed through the accession number CP166097.1. As a member of the Pectobacterium genus, P. aroidearum is known for its role as a plant pathogen, particularly affecting crops such as potatoes and other aroids. Its Gram-negative nature suggests a complex cell wall structure that may play a role in its virulence and interaction with host plants. The presence of flagella is significant as it may facilitate the bacterium's movement towards plant tissues, enhancing its ability to infect and cause disease. Understanding the traits of Pectobacterium aroidearum Ec106 provides insight into its ecological role as a pathogen. Its motility and genomic characteristics can influence its spread and impact on agricultural systems. The streamlined genomic structure may also suggest an evolutionary adaptation to its specific ecological niche, allowing it to efficiently exploit host plants. This emphasizes the importance of studying such microorganisms in the context of agricultural health and disease management strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium aroidearum
StrainEc106

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium aroidearum Ec106, Complete Genome

Gene Summary

Adenine Count

1273407 bp

Thymine Count

1281748 bp

Guanine Count

1367419 bp

Cytosine Count

1358884 bp

Genome Length

5281458 bp

Protein-coding Genes

4528 genes

Non-Coding Genes

231 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmgAB8809_23545C6DJG3Positive5226167 - 522805670070.1
16s rrna (guanine(527)-n(7))-methyltransferase rsmgAB8809_23550C6DJG4Positive5228139 - 522875923186.2
f0f1 atp synthase subunit iAB8809_23555P0ABC1Positive5229383 - 522976613532.0
f0f1 atp synthase subunit aAB8809_23560C6DJG6Positive5229789 - 523058929665.3
f0f1 atp synthase subunit cAB8809_23565Q6CYJ0Positive5230639 - 52308788211.64
f0f1 atp synthase subunit bAB8809_23570Q6CYJ1Positive5230942 - 523141217298.9
f0f1 atp synthase subunit deltaAB8809_23575C6DJG9Positive5231427 - 523196019318.5
f0f1 atp synthase subunit alphaAB8809_23580C6DJH0Positive5231973 - 523351455308.2
f0f1 atp synthase subunit gammaAB8809_23585C6DJH1Positive5233567 - 523443031434.1
f0f1 atp synthase subunit betaAB8809_23590C6DJH2Positive5234478 - 523586050228.4

Displaying genes 4711 – 4720 of 4759 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.