Pectobacterium aroidearum Ec106

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium aroidearum Ec106 is a Gram-negative bacterium characterized by the presence of flagella, which enable motility. This organism possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and survival in various environments. The genomic information for Pectobacterium aroidearum Ec106 can be accessed through the accession number CP166097.1. As a member of the Pectobacterium genus, P. aroidearum is known for its role as a plant pathogen, particularly affecting crops such as potatoes and other aroids. Its Gram-negative nature suggests a complex cell wall structure that may play a role in its virulence and interaction with host plants. The presence of flagella is significant as it may facilitate the bacterium's movement towards plant tissues, enhancing its ability to infect and cause disease. Understanding the traits of Pectobacterium aroidearum Ec106 provides insight into its ecological role as a pathogen. Its motility and genomic characteristics can influence its spread and impact on agricultural systems. The streamlined genomic structure may also suggest an evolutionary adaptation to its specific ecological niche, allowing it to efficiently exploit host plants. This emphasizes the importance of studying such microorganisms in the context of agricultural health and disease management strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium aroidearum
StrainEc106

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium aroidearum Ec106, Complete Genome

Gene Summary

Adenine Count

1273407 bp

Thymine Count

1281748 bp

Guanine Count

1367419 bp

Cytosine Count

1358884 bp

Genome Length

5281458 bp

Protein-coding Genes

4528 genes

Non-Coding Genes

231 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dutp diphosphataseAB8809_22745C6DIC3Positive5038110 - 503856816256.7
nucleoid occlusion factor slmaAB8809_22750C6DIC4Positive5038683 - 503927923172.0
orotate phosphoribosyltransferaseAB8809_22755C6DIC6Negative5039467 - 504010823406.3
ribonuclease phAB8809_22760C6DIC7Negative5040314 - 504103025450.7
l-ala-d/l-glu epimeraseAB8809_22765P51981Positive5041475 - 504244034994.6
dipeptide abc transporter atp-binding proteinAB8809_22770Q6D3A9Positive5042485 - 504435668652.9
glutathione abc transporter substrate-binding proteinAB8809_22775Q8ZQM3Positive5044445 - 504598656916.6
abc transporter permeaseAB8809_22780Q6D3B1Positive5046005 - 504692533839.5
abc transporter permease subunitAB8809_22785Q6D3B2Positive5046934 - 504783332266.2
p1 family peptidaseAB8809_22790A0MTQ2Positive5047860 - 504891836923.4

Displaying genes 4551 – 4560 of 4759 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.