Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphomethylpyrimidine synthase thic | AB8809_22245 | Q6DAM0 | Positive | 4926702 - 4928657 | 72713.4 |
| thiamine phosphate synthase | AB8809_22250 | Q6DAM1 | Positive | 4928654 - 4929295 | 23318.0 |
| thif family adenylyltransferase | AB8809_22255 | P30138 | Positive | 4929297 - 4930076 | 27393.0 |
| sulfur carrier protein this | AB8809_22260 | O32583 | Positive | 4930073 - 4930273 | 7269.64 |
| thiazole synthase | AB8809_22265 | C6DHS2 | Positive | 4930275 - 4931060 | 27332.4 |
| 2-iminoacetate synthase thih | AB8809_22270 | Q9S498 | Positive | 4931057 - 4932178 | 42589.9 |
| hypothetical protein | AB8809_22275 | Not Available | Positive | 4932322 - 4932573 | 8676.51 |
| plp-dependent aminotransferase family protein | AB8809_22280 | P39389 | Negative | 4932570 - 4933994 | 53290.7 |
| duf1127 domain-containing protein | AB8809_22285 | P39390 | Positive | 4934168 - 4934359 | 7779.52 |
| shikimate transporter | AB8809_22290 | P76350 | Negative | 4934454 - 4935851 | 50287.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
