Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type 4b pilus protein pilo2 | AB8809_20395 | Not Available | - | 4518216 - 4519529 | 47629.6 |
| piln family type ivb pilus formation outer membrane protein | AB8809_20400 | Q9S142 | - | 4519540 - 4521204 | 59185.9 |
| type iv pilus biogenesis protein pilm | AB8809_20405 | Not Available | - | 4521214 - 4521660 | 15978.5 |
| tcpq domain-containing protein | AB8809_20410 | Not Available | - | 4521660 - 4523003 | 47353.8 |
| duf29 domain-containing protein | AB8809_20415 | Not Available | - | 4523154 - 4523591 | 16806.6 |
| hypothetical protein | AB8809_20420 | Not Available | - | 4523663 - 4524247 | 22196.8 |
| single-stranded dna-binding protein | AB8809_20425 | Q9RHF4 | - | 4524351 - 4524899 | 20079.5 |
| sty4534 family ice replication protein | AB8809_20430 | Not Available | - | 4524959 - 4525468 | 18337.4 |
| dna topoisomerase iii | AB8809_20435 | P43704 | - | 4526103 - 4528112 | 74634.5 |
| pfl_4669 family integrating conjugative element protein | AB8809_20440 | Not Available | - | 4528127 - 4528879 | 28157.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.