Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | AB8809_00545 | P07018 | Negative | 130604 - 132250 | 59139.9 |
| methyl-accepting chemotaxis protein | AB8809_00550 | P02942 | Negative | 132846 - 134516 | 60031.6 |
| methyl-accepting chemotaxis protein | AB8809_00555 | P21823 | Negative | 135160 - 136830 | 59752.2 |
| methyl-accepting chemotaxis protein | AB8809_00560 | P21822 | Negative | 137110 - 138789 | 59675.0 |
| gntp family transporter | AB8809_00565 | Q46892 | Negative | 139094 - 140452 | 47088.9 |
| 2-oxo-tetronate isomerase | AB8809_00570 | Q6CZ23 | Negative | 140643 - 141425 | 29033.6 |
| 3-oxo-tetronate 4-phosphate decarboxylase | AB8809_00575 | Q6CZ24 | Negative | 141459 - 142115 | 23815.4 |
| 3-oxo-tetronate kinase | AB8809_00580 | Q6CZ25 | Negative | 142112 - 143386 | 45474.1 |
| l-threonate dehydrogenase | AB8809_00585 | Q6CZ26 | Negative | 143383 - 144297 | 31643.3 |
| dna-binding transcriptional repressor ygbi | AB8809_00590 | P52598 | Positive | 144634 - 145395 | 27325.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
