Pectobacterium aroidearum Ec106

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium aroidearum Ec106 is a Gram-negative bacterium characterized by the presence of flagella, which enable motility. This organism possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and survival in various environments. The genomic information for Pectobacterium aroidearum Ec106 can be accessed through the accession number CP166097.1. As a member of the Pectobacterium genus, P. aroidearum is known for its role as a plant pathogen, particularly affecting crops such as potatoes and other aroids. Its Gram-negative nature suggests a complex cell wall structure that may play a role in its virulence and interaction with host plants. The presence of flagella is significant as it may facilitate the bacterium's movement towards plant tissues, enhancing its ability to infect and cause disease. Understanding the traits of Pectobacterium aroidearum Ec106 provides insight into its ecological role as a pathogen. Its motility and genomic characteristics can influence its spread and impact on agricultural systems. The streamlined genomic structure may also suggest an evolutionary adaptation to its specific ecological niche, allowing it to efficiently exploit host plants. This emphasizes the importance of studying such microorganisms in the context of agricultural health and disease management strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium aroidearum
StrainEc106

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium aroidearum Ec106, Complete Genome

Gene Summary

Adenine Count

1273407 bp

Thymine Count

1281748 bp

Guanine Count

1367419 bp

Cytosine Count

1358884 bp

Genome Length

5281458 bp

Protein-coding Genes

4528 genes

Non-Coding Genes

231 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
abc transporter permeaseAB8809_00095A0A0H2ZGW7Positive22274 - 2325135656.2
abc transporter permeaseAB8809_00100P42063Positive23248 - 2415632882.4
dipeptide abc transporter atp-binding proteinAB8809_00105Q3Z3V4Positive24196 - 2600466646.1
ydgh/bhsa/mcba-like domain containing proteinAB8809_00110P0AB42Negative26080 - 263378799.48
aliphatic sulfonates abc transporter atp-binding proteinAB8809_00115Q6CYU2Negative26510 - 2731028700.9
aliphatic sulfonate abc transporter permease ssucAB8809_00120P75851Negative27307 - 2810128804.7
fmnh2-dependent alkanesulfonate monooxygenaseAB8809_00125C6DGK1Negative28112 - 2925441600.4
sulfonate abc transporter substrate-binding proteinAB8809_00130P75853Negative29313 - 3033537157.9
hypothetical proteinAB8809_00135Not AvailablePositive30848 - 309794499.61
hypothetical proteinAB8809_00140P0AA77Positive31020 - 311996294.21

Displaying genes 181 – 190 of 4759 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.