Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tyrosine-type recombinase/integrase | AB8809_08755 | P37326 | + | 1907935 - 1909740 | 68174.0 |
| hypothetical protein | AB8809_08760 | Not Available | + | 1909958 - 1910503 | 20643.4 |
| hypothetical protein | AB8809_08765 | Not Available | + | 1910592 - 1911371 | 30161.7 |
| hypothetical protein | AB8809_08770 | Not Available | + | 1911470 - 1912336 | 32840.7 |
| helix-turn-helix domain-containing protein | AB8809_08775 | P0ACH3 | - | 1912629 - 1912877 | 9132.72 |
| helix-turn-helix domain-containing protein | AB8809_08780 | P0ACH3 | - | 1913255 - 1913527 | 10257.2 |
| hcp family type vi secretion system effector | AB8809_08785 | Q9HI36 | + | 1914147 - 1914665 | 19081.5 |
| type vi secretion system tip protein tssi/vgrg | AB8809_08790 | E0SIS4 | + | 1914757 - 1916607 | 67433.1 |
| duf1795 domain-containing protein | AB8809_08795 | Q9I738 | + | 1916636 - 1917082 | 16295.2 |
| rhs repeat-associated core domain-containing protein | AB8809_08800 | E0SAK8 | + | 1917075 - 1921370 | 161716.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.