Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 4916090 - 4917629 | Not Available |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | AB8809_22200 | C6DHT5 | Positive | 4918234 - 4919823 | 57476.3 |
| phosphoribosylamine--glycine ligase | AB8809_22205 | Q8ZAR2 | Positive | 4919841 - 4921127 | 45307.9 |
| duf1481 domain-containing protein | AB8809_22210 | P32681 | Negative | 4921197 - 4921883 | 25912.0 |
| nucleoid-associated protein hu-alpha | AB8809_22215 | P52680 | Negative | 4921888 - 4922160 | 9520.45 |
| yjag family protein | AB8809_22220 | P0A1U5 | Negative | 4922365 - 4922955 | 22559.1 |
| deoxyribonuclease v | AB8809_22225 | C6DHT0 | Negative | 4923033 - 4923722 | 25459.6 |
| uroporphyrinogen decarboxylase | AB8809_22230 | C6DHS9 | Negative | 4923738 - 4924802 | 39119.2 |
| nad(+) diphosphatase | AB8809_22235 | C6DHS8 | Negative | 4924951 - 4925733 | 29834.8 |
| sigma d regulator | AB8809_22240 | C6DHS7 | Positive | 4925842 - 4926303 | 17551.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
