Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-2 | AB8809_19545 | C6DKK3 | - | 4336831 - 4339530 | 98577.1 |
| transcription termination factor nusa | AB8809_19550 | P37430 | - | 4339556 - 4341085 | 56322.6 |
| ribosome maturation factor rimp | AB8809_19555 | Q6D9A7 | - | 4341107 - 4341559 | 16604.0 |
| Trna-met | Not Available | Not Available | + | 4341778 - 4341854 | Not Available |
| response regulator transcription factor | AB8809_19565 | P37640 | - | 4342177 - 4342791 | 22803.8 |
| duf2589 domain-containing protein | AB8809_19570 | Not Available | + | 4343225 - 4343818 | 21977.0 |
| lysozyme | AB8809_19575 | Q9T1T5 | + | 4343811 - 4344272 | 16983.1 |
| hypothetical protein | AB8809_19580 | Not Available | + | 4344329 - 4344760 | 15544.1 |
| amino acid adenylation domain-containing protein | AB8809_19585 | O30409 | - | 4345007 - 4348105 | 117168.0 |
| duf2589 domain-containing protein | AB8809_19590 | O29830 | + | 4348431 - 4349060 | 22252.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.