Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase 43 family protein | AB8809_18945 | Q9WXE8 | + | 4193670 - 4195238 | 58905.4 |
| hypothetical protein | AB8809_18950 | Not Available | - | 4195317 - 4195742 | 15208.3 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | AB8809_18955 | P52647 | + | 4196129 - 4199662 | 129458.0 |
| cytochrome b561 | AB8809_18960 | P0ABE5 | + | 4199946 - 4200482 | 20085.1 |
| deaminated glutathione amidase | AB8809_18965 | P58054 | + | 4200504 - 4201301 | 28978.3 |
| l,d-transpeptidase family protein | AB8809_18970 | P0AAY0 | + | 4201485 - 4202555 | 38361.7 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein | AB8809_18975 | Q9WZY4 | - | 4202615 - 4203895 | 45547.3 |
| mannitol dehydrogenase family protein | AB8809_18980 | P33029 | + | 4204218 - 4205705 | 54943.9 |
| hypothetical protein | AB8809_18985 | Not Available | - | 4205698 - 4206072 | 13374.1 |
| mfs transporter | AB8809_18990 | P94488 | + | 4206456 - 4207982 | 56437.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.