Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | AB8809_18845 | P29822 | - | 4174602 - 4175867 | 46429.4 |
| gdp-mannose pyrophosphatase nudk | AB8809_18850 | Q6D8X4 | - | 4176249 - 4176830 | 21570.8 |
| glycerol dehydrogenase | AB8809_18855 | P32816 | + | 4177200 - 4178297 | 39016.5 |
| mfs transporter | AB8809_18860 | P39381 | + | 4178497 - 4179663 | 41640.5 |
| 2-hydroxymuconate tautomerase family protein | AB8809_18865 | P45418 | + | 4179677 - 4179883 | 7547.2 |
| nramp family divalent metal transporter | AB8809_18870 | C6D9J9 | - | 4179980 - 4181218 | 43944.1 |
| nucleotide exchange factor grpe | AB8809_18875 | C6D9J8 | - | 4181460 - 4182047 | 21675.8 |
| nad(+) kinase | AB8809_18880 | Q6D8Y0 | + | 4182196 - 4183074 | 32110.5 |
| dna repair protein recn | AB8809_18885 | P05824 | + | 4183156 - 4184817 | 61523.5 |
| outer membrane protein assembly factor bame | AB8809_18890 | Q7CPZ3 | + | 4184971 - 4185306 | 12154.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.