Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-asparagine permease | AB8809_18295 | P40812 | + | 4045426 - 4046877 | 52097.7 |
| ornithine decarboxylase | AB8809_18300 | P21169 | - | 4047153 - 4049306 | 80172.7 |
| hypothetical protein | AB8809_18305 | Not Available | - | 4049538 - 4049669 | 4865.95 |
| Trna-phe | Not Available | Not Available | + | 4050179 - 4050254 | Not Available |
| tyrosine-type recombinase/integrase | AB8809_18315 | P08320 | + | 4050416 - 4051678 | 47841.6 |
| ylci/ynfo family protein | AB8809_18320 | A5A607 | - | 4051783 - 4051977 | 7104.43 |
| hypothetical protein | AB8809_18325 | Not Available | + | 4052163 - 4052504 | 12286.3 |
| hypothetical protein | AB8809_18330 | Not Available | - | 4053096 - 4053266 | 6156.38 |
| mobc family replication-relaxation protein | AB8809_18335 | Not Available | + | 4053408 - 4054151 | 29132.8 |
| type ii toxin-antitoxin system antitoxin ccda | AB8809_18340 | P62553 | + | 4054210 - 4054428 | 8178.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.