Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| secy-interacting protein | AB8809_17995 | C6DAH5 | - | 3980571 - 3981119 | 20260.2 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | AB8809_18000 | C6DAH4 | + | 3981190 - 3982038 | 32301.9 |
| nucleotide 5'-monophosphate nucleosidase ppnn | AB8809_18005 | P0ADS0 | + | 3982497 - 3983861 | 50385.0 |
| flap endonuclease xni | AB8809_18010 | C6DAH2 | + | 3983940 - 3984722 | 28634.2 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | AB8809_18015 | C6DAH1 | - | 3984779 - 3985879 | 42125.8 |
| duf423 domain-containing protein | AB8809_18020 | P0ADR4 | - | 3985872 - 3986267 | 14501.1 |
| transcriptional regulator gcva | AB8809_18025 | P0A9F8 | - | 3986407 - 3987330 | 34521.3 |
| ygdi/ygdr family lipoprotein | AB8809_18030 | P65293 | - | 3987868 - 3988089 | 8060.68 |
| cysteine desulfurase csda | AB8809_18035 | Q46925 | + | 3988273 - 3989478 | 43158.6 |
| cysteine desulfurase sulfur acceptor subunit csde | AB8809_18040 | P0AGF3 | + | 3989482 - 3989937 | 16828.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.