Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| multidrug abc transporter permease/atp-binding protein | AB8809_17695 | P33941 | - | 3901028 - 3902674 | 61660.3 |
| ig-like domain-containing protein | AB8809_17700 | Not Available | + | 3903365 - 3917989 | 491555.0 |
| tolc family outer membrane protein | AB8809_17705 | Q8G0Y6 | + | 3918125 - 3919552 | 52292.6 |
| type i secretion system permease/atpase | AB8809_17710 | P0DKX5 | + | 3919592 - 3921730 | 78686.4 |
| hlyd family type i secretion periplasmic adaptor subunit | AB8809_17715 | Q7ANN5 | + | 3921741 - 3922910 | 43501.4 |
| glycoside hydrolase family 28 protein | AB8809_17720 | P18192 | - | 3923004 - 3924212 | 42647.6 |
| pectate lyase peli | AB8809_17725 | A1DBJ7 | + | 3924915 - 3925970 | 37799.3 |
| mannonate dehydratase | AB8809_17730 | C6DAZ5 | - | 3926071 - 3927270 | 45134.6 |
| fcd domain-containing protein | AB8809_17735 | P39161 | - | 3927533 - 3928267 | 27979.2 |
| alpha/beta hydrolase | AB8809_17740 | P82597 | + | 3928479 - 3929672 | 44888.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.