Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 6,7-dimethyl-8-ribityllumazine synthase | AB8809_17545 | C6DB33 | - | 3864354 - 3864830 | 16481.9 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | AB8809_17550 | P25539 | - | 3864941 - 3866077 | 41151.4 |
| transcriptional regulator nrdr | AB8809_17555 | C6DB31 | - | 3866113 - 3866562 | 17230.9 |
| duf3251 domain-containing protein | AB8809_17560 | P46122 | + | 3866780 - 3867349 | 20433.6 |
| protein translocase subunit secf | AB8809_17565 | P0AG95 | - | 3867554 - 3868465 | 32922.8 |
| protein translocase subunit secd | AB8809_17570 | Q9ZFF8 | - | 3868539 - 3870386 | 66834.3 |
| preprotein translocase subunit yajc | AB8809_17575 | P0ADZ9 | - | 3870414 - 3870746 | 11828.7 |
| trna guanosine(34) transglycosylase tgt | AB8809_17580 | C6DB26 | - | 3870855 - 3872000 | 43451.1 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | AB8809_17585 | C6DB25 | - | 3872098 - 3873165 | 39269.8 |
| acp phosphodiesterase | AB8809_17590 | Q6D857 | + | 3873357 - 3873938 | 22828.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.