Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nicotinamide mononucleotide deamidase-related protein yfay | AB8809_17095 | B7LAR4 | - | 3755361 - 3756554 | 43109.1 |
| tyrosine transporter tyrp | AB8809_17100 | P0AAD4 | + | 3756835 - 3757983 | 40807.5 |
| yfaz family outer membrane protein | AB8809_17105 | P76471 | - | 3758185 - 3758724 | 18690.9 |
| catalase | AB8809_17110 | P42321 | + | 3758976 - 3759197 | 8295.87 |
| o-succinylbenzoate--coa ligase | AB8809_17115 | P37418 | - | 3759194 - 3760657 | 53218.8 |
| o-succinylbenzoate synthase | AB8809_17120 | C6DBP5 | - | 3760645 - 3761616 | 35740.8 |
| 1,4-dihydroxy-2-naphthoyl-coa synthase | AB8809_17125 | P0ABU1 | - | 3761616 - 3762473 | 31472.6 |
| hypothetical protein | AB8809_17130 | Q6D7W3 | - | 3762479 - 3763241 | 27734.1 |
| 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase | AB8809_17135 | C6DBP2 | - | 3763298 - 3764980 | 61000.0 |
| isochorismate synthase menf | AB8809_17140 | P38051 | - | 3765201 - 3766523 | 49296.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.