Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aspartate/glutamate racemase family protein | AB8809_16795 | A0A0H3JGH6 | + | 3689590 - 3690297 | 25851.1 |
| protein ypfm | AB8809_16800 | Not Available | - | 3690466 - 3690525 | 2311.86 |
| arsc family reductase | AB8809_16805 | P24178 | + | 3690759 - 3691136 | 14519.3 |
| succinyl-diaminopimelate desuccinylase | AB8809_16810 | Q6D7N4 | + | 3691138 - 3692265 | 41087.0 |
| m15 family metallopeptidase | AB8809_16815 | P43941 | + | 3692262 - 3692936 | 25545.8 |
| ypfn family protein | AB8809_16820 | C6DBU8 | + | 3692939 - 3693130 | 7666.28 |
| lysr family transcriptional regulator | AB8809_16825 | P52696 | - | 3693194 - 3694093 | 33660.5 |
| citmhs family transporter | AB8809_16830 | P42308 | + | 3694577 - 3695899 | 46614.1 |
| acyclic terpene utilization atua family protein | AB8809_16835 | Not Available | + | 3695961 - 3697301 | 47774.1 |
| hypothetical protein | AB8809_16840 | Not Available | + | 3697301 - 3697600 | 10728.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.