Pectobacterium aroidearum Ec106

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium aroidearum
StrainEc106

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium aroidearum Ec106

Accession NumberCP166097.1

Gene Summary

Adenine Count

1273407 bp

Thymine Count

1281748 bp

Guanine Count

1367419 bp

Cytosine Count

1358884 bp

Genome Length

5281458 bp

Protein-coding Genes

4528 genes

Non-Coding Genes

231 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
peptidoglycan dd-transpeptidase mrdaAB8809_16745P0AD67+3679979 - 368188371401.0
peptidoglycan glycosyltransferase mrdbAB8809_16750P0ABG8+3681893 - 368300540676.8
endolytic peptidoglycan transglycosylase rlpaAB8809_16755Q8ZDG6+3683019 - 368414639156.8
d-alanyl-d-alanine carboxypeptidase dacaAB8809_16760P0AEB4+3684313 - 368552444089.8
duf493 family protein ybedAB8809_16765C6DBV8+3685675 - 36859389846.98
lipoyl(octanoyl) transferase lipbAB8809_16770C6DBV7+3686096 - 368677925231.7
lipoyl synthaseAB8809_16775C6DBV6+3687007 - 368797236207.8
sec-independent protein translocase subunit tataAB8809_16780C6CQJ7-3688055 - 36882526808.29
fluoride efflux transporter crcbAB8809_16785C6DBV4+3688714 - 368909713402.7
transcription antiterminator/rna stability regulator cspeAB8809_16790P0A974-3689162 - 36893717424.7

Displaying genes 3351 – 3360 of 4759 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites