Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 1 protein | AB8809_15295 | P40740 | - | 3347359 - 3348795 | 54002.9 |
| helix-turn-helix domain-containing protein | AB8809_15300 | Q9X5V4 | - | 3348996 - 3349451 | 17154.9 |
| mfs transporter | AB8809_15305 | P76269 | + | 3349518 - 3350753 | 42639.3 |
| multidrug effflux mfs transporter | AB8809_15310 | P28246 | + | 3350922 - 3352121 | 43174.1 |
| helix-turn-helix domain-containing protein | AB8809_15315 | P9WJA6 | - | 3352111 - 3352413 | 11194.7 |
| type ii toxin-antitoxin system rele/pare family toxin | AB8809_15320 | O53332 | - | 3352432 - 3352770 | 13128.0 |
| winged helix-turn-helix transcriptional regulator | AB8809_15325 | P0ACN2 | - | 3352999 - 3353439 | 16839.0 |
| nad(p)-dependent oxidoreductase | AB8809_15330 | P71037 | + | 3353542 - 3354153 | 21533.5 |
| glutathione-dependent disulfide-bond oxidoreductase | AB8809_15335 | Q46845 | + | 3354321 - 3355160 | 30902.5 |
| multidrug effflux mfs transporter | AB8809_15340 | P96709 | - | 3355205 - 3356461 | 44546.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.