Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cell envelope biogenesis protein ompa | AB8809_14610 | Not Available | + | 3205824 - 3206702 | 31384.7 |
| gyri-like domain-containing protein | AB8809_14615 | C6DEF0 | - | 3206863 - 3207327 | 17460.4 |
| dhcw motif cupin fold protein | AB8809_14620 | Not Available | - | 3207563 - 3207892 | 12528.7 |
| rhodanese family protein | AB8809_14625 | P55734 | - | 3207958 - 3208494 | 19085.5 |
| emmdr/yeeo family multidrug/toxin efflux mate transporter | AB8809_14630 | P76352 | + | 3208902 - 3210308 | 51044.8 |
| mfs transporter | AB8809_14635 | P17583 | - | 3210347 - 3211516 | 41332.2 |
| outer membrane protein ompx | AB8809_14640 | P25253 | - | 3211860 - 3212375 | 18166.0 |
| threonine/homoserine exporter rhta | AB8809_14645 | E1W9W8 | + | 3212752 - 3213639 | 31106.2 |
| adenylate kinase | AB8809_14650 | Not Available | - | 3213627 - 3214178 | 21931.2 |
| dna starvation/stationary phase protection protein dps | AB8809_14655 | C6DEE2 | + | 3214527 - 3215030 | 18409.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.