Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna pseudouridine(516) synthase rsua | AB8809_14410 | P65841 | - | 3163111 - 3163806 | 26232.2 |
| yech family metal-binding protein | AB8809_14415 | P46887 | + | 3164031 - 3164270 | 8740.39 |
| dead/deah box helicase | AB8809_14420 | P33919 | + | 3164273 - 3166033 | 66418.6 |
| 50s ribosomal protein l25 | AB8809_14425 | C6DEJ2 | + | 3166292 - 3166576 | 10406.6 |
| duf1624 domain-containing protein | AB8809_14430 | Not Available | + | 3166676 - 3167824 | 43745.9 |
| nucleoid-associated protein yejk | AB8809_14435 | C6DEJ0 | - | 3167911 - 3168918 | 37971.7 |
| yejl family protein | AB8809_14440 | C6DEI9 | + | 3169136 - 3169366 | 8414.17 |
| lps biosynthesis-modulating metalloenzyme yejm | AB8809_14445 | P40709 | + | 3169381 - 3171129 | 66696.0 |
| Trna-pro | Not Available | Not Available | + | 3171208 - 3171284 | Not Available |
| integrase domain-containing protein | AB8809_14455 | P32053 | + | 3171502 - 3172731 | 46411.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.