Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| imidazole glycerol phosphate synthase subunit hisf | AB8809_13910 | C6DF71 | + | 3038861 - 3039637 | 28408.9 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | AB8809_13915 | Q8ZFY1 | + | 3039631 - 3040263 | 23598.9 |
| amidohydrolase | AB8809_13920 | A0A1I9LN01 | - | 3040319 - 3042175 | 67045.2 |
| integration host factor subunit beta | AB8809_13925 | Q6D404 | - | 3042479 - 3042763 | 10581.7 |
| 30s ribosomal protein s1 | AB8809_13930 | P37985 | - | 3042855 - 3044528 | 61239.7 |
| (d)cmp kinase | AB8809_13935 | C6DF66 | - | 3044644 - 3045321 | 24439.4 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | AB8809_13940 | C6DF65 | - | 3045544 - 3046833 | 46523.9 |
| 3-phosphoserine/phosphohydroxythreonine transaminase | AB8809_13945 | C6DF64 | - | 3047040 - 3048125 | 40128.9 |
| 30s ribosomal protein s12 methylthiotransferase accessory factor ycao | AB8809_13950 | P75838 | + | 3048453 - 3050216 | 65704.0 |
| formate transporter foca | AB8809_13955 | P0AC25 | + | 3050668 - 3051528 | 30931.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.