Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lauroyl-kdo(2)-lipid iv(a) myristoyltransferase | AB8809_13460 | P24205 | - | 2934255 - 2935226 | 37552.7 |
| murein dd-endopeptidase mepm | AB8809_13465 | P0AFT0 | - | 2935467 - 2936789 | 49288.8 |
| zinc abc transporter substrate-binding protein znua | AB8809_13470 | Q8ZEU2 | - | 2936802 - 2937821 | 37146.3 |
| zinc abc transporter atp-binding protein znuc | AB8809_13475 | Q6D4A8 | + | 2937898 - 2938656 | 27744.2 |
| zinc abc transporter permease subunit znub | AB8809_13480 | P39832 | + | 2938653 - 2939438 | 27823.4 |
| laci family dna-binding transcriptional regulator | AB8809_13485 | Q45831 | - | 2939527 - 2940486 | 34909.1 |
| pts sugar transporter subunit iic | AB8809_13490 | O05507 | + | 2940949 - 2942277 | 48517.6 |
| pts lactose/cellobiose transporter subunit iia | AB8809_13495 | P69793 | + | 2942443 - 2942748 | 11479.9 |
| carbohydrate porin | AB8809_13500 | Q65QT7 | + | 2942916 - 2944295 | 50419.6 |
| holliday junction branch migration dna helicase ruvb | AB8809_13505 | C6DFF2 | - | 2944374 - 2945384 | 37223.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.