Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lytr/algr family response regulator transcription factor | AB8809_13210 | P0AE40 | - | 2879382 - 2880131 | 29155.2 |
| lyts/yhck type 5tm receptor domain-containing protein | AB8809_13215 | P0AA94 | - | 2880128 - 2881873 | 64409.1 |
| eal domain-containing protein | AB8809_13220 | Q9ABX9 | - | 2882039 - 2884207 | 80835.7 |
| hypothetical protein | AB8809_13225 | Not Available | - | 2884603 - 2884860 | 9345.94 |
| xre family transcriptional regulator | AB8809_13230 | Q47587 | + | 2885259 - 2885993 | 26699.7 |
| mor transcription activator family protein | AB8809_13235 | Q47588 | + | 2886478 - 2886828 | 13362.0 |
| 4fe-4s binding protein | AB8809_13240 | P52636 | + | 2887271 - 2888377 | 41516.8 |
| nadp-dependent isocitrate dehydrogenase | AB8809_13245 | P08200 | - | 2888426 - 2889679 | 45879.4 |
| 23s rrna pseudouridine(2457) synthase rlue | AB8809_13250 | Q8ZFQ3 | + | 2889811 - 2890437 | 23857.8 |
| nudix hydrolase | AB8809_13255 | A7ZKS4 | + | 2890430 - 2890876 | 17096.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.