Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-3 | AB8809_13160 | C6DFY7 | - | 2867174 - 2867716 | 20579.2 |
| threonine--trna ligase | AB8809_13165 | C6DFY6 | - | 2867720 - 2869648 | 73855.2 |
| amino acid permease | AB8809_13170 | P15993 | - | 2869909 - 2871309 | 50947.6 |
| yebo family protein | AB8809_13175 | Q8ZFG9 | - | 2871436 - 2871699 | 10016.3 |
| dna-binding transcriptional regulator kdgr | AB8809_13180 | P37728 | - | 2871957 - 2872748 | 29655.6 |
| oligogalacturonate lyase | AB8809_13185 | Q59418 | - | 2872963 - 2874129 | 44403.0 |
| protease htpx | AB8809_13190 | C6DFY1 | - | 2874471 - 2875352 | 32027.2 |
| glycerophosphodiester phosphodiesterase family protein | AB8809_13195 | Q9JL56 | - | 2875519 - 2876367 | 30865.8 |
| sn-glycerol-3-phosphate abc transporter substrate-binding protein ugpb | AB8809_13200 | A1JID7 | - | 2876398 - 2877687 | 47910.9 |
| ofa family mfs transporter | AB8809_13205 | P37662 | - | 2877974 - 2879197 | 43366.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.