Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:other | Not Available | Not Available | + | 2758582 - 2758711 | Not Available |
| trimeric intracellular cation channel family protein | AB8809_12665 | P45122 | - | 2758896 - 2759522 | 22766.9 |
| exodeoxyribonuclease iii | AB8809_12670 | P09030 | + | 2759941 - 2760747 | 30760.3 |
| duf1496 domain-containing protein | AB8809_12675 | P76227 | - | 2760899 - 2761189 | 10531.9 |
| dna topoisomerase iii | AB8809_12680 | P40687 | - | 2761186 - 2763111 | 72376.9 |
| nad(p)h nitroreductase | AB8809_12685 | P0ACY2 | - | 2763212 - 2763763 | 20210.1 |
| signal peptide peptidase sppa | AB8809_12690 | Q8Z6F3 | + | 2764067 - 2765917 | 67274.4 |
| asparaginase | AB8809_12695 | P0A963 | + | 2766223 - 2767242 | 37082.3 |
| bifunctional nicotinamidase/pyrazinamidase | AB8809_12700 | P21369 | + | 2767262 - 2767909 | 23460.7 |
| yeac family protein | AB8809_12705 | P76231 | - | 2767972 - 2768250 | 10466.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.