Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| electron transport complex subunit rsxc | AB8809_12410 | C6DH15 | + | 2701396 - 2703795 | 85403.1 |
| electron transport complex subunit rsxd | AB8809_12415 | C6DH14 | + | 2703796 - 2704851 | 38368.9 |
| electron transport complex subunit rsxg | AB8809_12420 | C6DH13 | + | 2704862 - 2705491 | 22730.2 |
| electron transport complex subunit e | AB8809_12425 | B1JKN8 | + | 2705488 - 2706195 | 24730.9 |
| endonuclease iii | AB8809_12430 | P0AB84 | + | 2706192 - 2706827 | 23342.4 |
| aminotransferase class v-fold plp-dependent enzyme | AB8809_12435 | Q8LGM7 | + | 2707176 - 2709638 | 92326.0 |
| dipeptide/tripeptide permease dtpa | AB8809_12440 | C6DH09 | + | 2710258 - 2711778 | 54849.3 |
| hth-type transcriptional regulator cysb | AB8809_12445 | P45600 | - | 2711917 - 2712891 | 35926.2 |
| type i dna topoisomerase | AB8809_12450 | P0A2I2 | - | 2713272 - 2715872 | 97551.3 |
| ycin family protein | AB8809_12455 | P0AB63 | + | 2716278 - 2716547 | 10328.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.