Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative virulence factor | AB8809_12005 | Not Available | - | 2623865 - 2626327 | 92186.0 |
| virulence factor srfb | AB8809_12010 | Not Available | - | 2626324 - 2629311 | 112450.0 |
| srfa family protein | AB8809_12015 | Not Available | - | 2629314 - 2630711 | 49491.4 |
| hypothetical protein | AB8809_12020 | Not Available | + | 2630903 - 2631025 | 4457.54 |
| expansin exlx1 family cellulose-binding protein | AB8809_12025 | O34918 | - | 2631022 - 2631711 | 25261.2 |
| osmc family protein | AB8809_12030 | P0C0L2 | + | 2632044 - 2632472 | 15109.0 |
| cytochrome b562 | AB8809_12035 | P0ABE8 | + | 2632791 - 2633186 | 14063.9 |
| tetr/acrr family transcriptional regulator | AB8809_12040 | P75811 | + | 2633293 - 2633847 | 20763.8 |
| mfs transporter | AB8809_12045 | P75810 | + | 2633985 - 2635181 | 41840.3 |
| gnat family n-acetyltransferase | AB8809_12050 | O32293 | + | 2635318 - 2635806 | 17822.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.