Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iii effector hrpk domain-containing protein | AB8809_11505 | P41501 | + | 2513977 - 2515737 | 62325.6 |
| hypothetical protein | AB8809_11510 | Not Available | - | 2515747 - 2515923 | 6627.48 |
| gfo/idh/moca family protein | AB8809_11515 | P40332 | + | 2516072 - 2517079 | 37527.6 |
| allophanate hydrolase | AB8809_11520 | Q936X2 | + | 2517261 - 2519063 | 63691.7 |
| urea carboxylase | AB8809_11525 | P32528 | + | 2519056 - 2522670 | 130460.0 |
| gntr family transcriptional regulator | AB8809_11530 | O05494 | + | 2522760 - 2523578 | 31556.4 |
| urea abc transporter substrate-binding protein | AB8809_11535 | P27017 | + | 2523575 - 2524843 | 46112.0 |
| urea abc transporter permease subunit urtb | AB8809_11540 | P0AEX8 | + | 2525227 - 2526801 | 56080.6 |
| urea abc transporter permease subunit urtc | AB8809_11545 | P22729 | + | 2526801 - 2527877 | 38855.9 |
| urea abc transporter atp-binding protein urtd | AB8809_11550 | O28881 | + | 2527870 - 2528706 | 30710.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.