Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fggy family carbohydrate kinase | AB8809_10455 | Q6D5T8 | + | 2259926 - 2261416 | 53121.6 |
| sugar phosphate isomerase/epimerase family protein | AB8809_10460 | Q6D5T7 | + | 2261515 - 2262513 | 37165.2 |
| sugar-binding transcriptional regulator | AB8809_10465 | P39140 | - | 2262602 - 2263546 | 33781.7 |
| lapa family protein | AB8809_10470 | P0ACV4 | + | 2263798 - 2264103 | 11457.3 |
| lipopolysaccharide assembly protein lapb | AB8809_10475 | P0AB60 | + | 2264116 - 2265285 | 44623.3 |
| zinc-dependent alcohol dehydrogenase family protein | AB8809_10480 | P14940 | - | 2265367 - 2266410 | 37506.5 |
| orotidine-5'-phosphate decarboxylase | AB8809_10485 | C6DK13 | + | 2266739 - 2267482 | 26486.9 |
| stress response translation initiation inhibitor ycih | AB8809_10490 | P08245 | + | 2267479 - 2267814 | 12039.8 |
| osmotically-inducible lipoprotein osmb | AB8809_10495 | P37723 | - | 2267873 - 2268088 | 6857.45 |
| l-ribulose-5-phosphate 4-epimerase | AB8809_10500 | P08203 | + | 2268423 - 2269118 | 25759.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.