Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| catalase/peroxidase hpi | AB8809_10255 | C6DK50 | + | 2216730 - 2218904 | 80673.7 |
| duf3861 domain-containing protein | AB8809_10260 | Not Available | - | 2218978 - 2219241 | 10288.6 |
| marr family winged helix-turn-helix transcriptional regulator | AB8809_10265 | P52003 | + | 2219323 - 2219736 | 15642.2 |
| putative urea abc transporter substrate-binding protein | AB8809_10270 | Q47537 | + | 2220092 - 2221150 | 37744.3 |
| abc transporter permease | AB8809_10275 | Q47539 | + | 2221174 - 2221989 | 30287.6 |
| abc transporter atp-binding protein | AB8809_10280 | Q55463 | + | 2221986 - 2222777 | 29423.9 |
| urea amidolyase associated protein uaap1 | AB8809_10285 | O31473 | + | 2222791 - 2223537 | 27984.0 |
| urea amidolyase associated protein uaap2 | AB8809_10290 | O31473 | + | 2223549 - 2224184 | 23557.0 |
| hypothetical protein | AB8809_10295 | Not Available | + | 2224175 - 2224315 | 5386.39 |
| urea carboxylase | AB8809_10300 | P32528 | + | 2224427 - 2228032 | 130752.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.