Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pfl_4669 family integrating conjugative element protein | AB8809_09055 | Not Available | - | 1972276 - 1973094 | 30182.3 |
| sty4528 family pathogenicity island replication protein | AB8809_09060 | Not Available | - | 1973375 - 1974589 | 44807.6 |
| duf2857 domain-containing protein | AB8809_09065 | Not Available | - | 1974589 - 1975149 | 20585.7 |
| parb family protein | AB8809_09070 | Not Available | - | 1975161 - 1976885 | 63146.4 |
| type ii toxin-antitoxin system hica family toxin | AB8809_09075 | Not Available | - | 1976878 - 1977138 | 9509.27 |
| para family protein | AB8809_09080 | Q60283 | - | 1977122 - 1977985 | 31713.6 |
| alpa family transcriptional regulator | AB8809_09085 | P33997 | - | 1978019 - 1978231 | 8224.03 |
| lysr family transcriptional regulator | AB8809_09090 | P77559 | - | 1978668 - 1979618 | 35598.1 |
| hypothetical protein | AB8809_09095 | P08504 | - | 1979982 - 1980375 | 14433.2 |
| hypothetical protein | AB8809_09100 | P0CF88 | + | 1980387 - 1980632 | 9282.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.