Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| imma/irre family metallo-endopeptidase | AB8809_08655 | P67702 | - | 1890680 - 1891909 | 46719.9 |
| hypothetical protein | AB8809_08660 | Not Available | - | 1892800 - 1892961 | 6500.73 |
| toxin-antitoxin system hicb family antitoxin | AB8809_08665 | Not Available | + | 1893199 - 1893393 | 7231.62 |
| hypothetical protein | AB8809_08670 | Not Available | + | 1893461 - 1893592 | 4561.49 |
| hypothetical protein | AB8809_08675 | Not Available | - | 1893667 - 1894353 | 27102.8 |
| hcp family type vi secretion system effector | AB8809_08680 | Q9HI36 | + | 1894869 - 1895354 | 18133.9 |
| hypothetical protein | AB8809_08685 | Not Available | - | 1895581 - 1896219 | 24258.5 |
| pd-(d/e)xk nuclease family protein | AB8809_08690 | Not Available | + | 1896582 - 1897703 | 42355.9 |
| tyrosine-type recombinase/integrase | AB8809_08695 | P39347 | - | 1897818 - 1899098 | 48974.1 |
| Trna-asn | Not Available | Not Available | + | 1899278 - 1899353 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.