Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer protein virb9 | AB8809_08405 | Q2YJ79 | - | 1846518 - 1847408 | 33008.1 |
| type iv secretion system protein | AB8809_08410 | Q7W2U0 | - | 1847408 - 1848091 | 26300.3 |
| hypothetical protein | AB8809_08415 | Not Available | - | 1848084 - 1848224 | 5018.22 |
| type iv secretion system protein | AB8809_08420 | Not Available | - | 1848312 - 1849352 | 36620.2 |
| eexn family lipoprotein | AB8809_08425 | Not Available | - | 1849364 - 1849588 | 8502.91 |
| type iv secretion system protein | AB8809_08430 | Not Available | - | 1849599 - 1850315 | 26790.4 |
| virb3 family type iv secretion system protein | AB8809_08435 | Q9RPY1 | - | 1850339 - 1853086 | 103906.0 |
| trbc/virb2 family protein | AB8809_08440 | Q7W2U5 | - | 1853096 - 1853377 | 9877.09 |
| lytic transglycosylase domain-containing protein | AB8809_08445 | Q2YIT5 | - | 1853374 - 1854039 | 24409.9 |
| hypothetical protein | AB8809_08450 | Not Available | - | 1854122 - 1854343 | 8033.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.