Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system ccda family antitoxin | AB8809_08355 | P62553 | + | 1837932 - 1838168 | 8928.44 |
| ccdb family protein | AB8809_08360 | Q52042 | + | 1838171 - 1838485 | 11598.3 |
| hypothetical protein | AB8809_08365 | P39347 | - | 1838579 - 1838722 | 5501.57 |
| hypothetical protein | AB8809_08370 | Not Available | + | 1839015 - 1839692 | 26550.5 |
| hypothetical protein | AB8809_08375 | Not Available | + | 1839711 - 1840430 | 27904.0 |
| mobc family replication-relaxation protein | AB8809_08380 | Not Available | - | 1840594 - 1841340 | 29104.6 |
| type iv secretory system conjugative dna transfer family protein | AB8809_08385 | P08098 | - | 1841349 - 1843211 | 69712.7 |
| trbm/kika/mpfk family conjugal transfer protein | AB8809_08390 | Not Available | - | 1843937 - 1844239 | 11080.6 |
| p-type dna transfer atpase virb11 | AB8809_08395 | Q8FXK7 | - | 1844283 - 1845299 | 38504.0 |
| virb10/trab/trbi family type iv secretion system protein | AB8809_08400 | Q8YDZ0 | - | 1845289 - 1846521 | 44290.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.