Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
1273407 bp
Thymine Count
1281748 bp
Guanine Count
1367419 bp
Cytosine Count
1358884 bp
Genome Length
5281458 bp
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2501 domain-containing protein | AB8809_08255 | P18390 | + | 1815787 - 1816266 | 16734.0 |
| h-ns family nucleoid-associated regulatory protein | AB8809_08260 | Q9L5H8 | - | 1816326 - 1816727 | 14879.8 |
| hypothetical protein | AB8809_08265 | Not Available | + | 1816830 - 1817066 | 8673.81 |
| type 4 pilus major pilin | AB8809_08270 | P58997 | + | 1817145 - 1817693 | 19879.9 |
| shufflon system plasmid conjugative transfer pilus tip adhesin pilv | AB8809_08275 | P09748 | + | 1817817 - 1819295 | 51866.8 |
| type vi secretion system paar protein | AB8809_08280 | Not Available | + | 1819484 - 1821199 | 61963.8 |
| cpcc family cysteine-rich protein | AB8809_08285 | Not Available | + | 1821196 - 1821390 | 7146.4 |
| duf4926 domain-containing protein | AB8809_08290 | Not Available | + | 1821408 - 1821617 | 7841.48 |
| hypothetical protein | AB8809_08295 | Not Available | - | 1821766 - 1821945 | 6943.51 |
| sefir domain-containing protein | AB8809_08300 | Not Available | - | 1822510 - 1824060 | 60113.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.