Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pectobacteriaceae
Genus
Pectobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Pectobacteriaceae |
| Genus | Pectobacterium |
| Species | Pectobacterium aroidearum |
| Strain | Ec106 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pectobacterium aroidearum Ec106
Accession NumberCP166097.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4528 genes
Non-Coding Genes
231 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system atpase tssh | AB8809_05250 | Q9I742 | + | 1168826 - 1171423 | 95392.1 |
| sigma-54 interaction domain-containing protein | AB8809_05255 | Q9KN48 | + | 1171426 - 1172964 | 57772.4 |
| type vi secretion system-associated protein vasi | AB8809_05260 | Not Available | + | 1172964 - 1173524 | 20278.2 |
| type vi secretion system protein tssa | AB8809_05265 | Not Available | + | 1173536 - 1174960 | 52475.8 |
| type vi secretion system membrane subunit tssm | AB8809_05270 | Q9I755 | + | 1174985 - 1178482 | 132641.0 |
| vasl domain-containing protein | AB8809_05275 | Not Available | + | 1178531 - 1179967 | 54958.2 |
| tetratricopeptide repeat protein | AB8809_05280 | Not Available | + | 1179996 - 1181351 | 50071.8 |
| hcp family type vi secretion system effector | AB8809_05285 | Q9HI36 | + | 1181889 - 1182407 | 19095.6 |
| type vi secretion system tip protein vgrg | AB8809_05290 | E0SAL0 | + | 1182637 - 1184673 | 75119.3 |
| hypothetical protein | AB8809_05295 | Not Available | + | 1184683 - 1185054 | 12269.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.