Pectobacterium aroidearum Ec106

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Pectobacterium

Description

Pectobacterium aroidearum Ec106 is a Gram-negative bacterium characterized by the presence of flagella, which enable motility. This organism possesses a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and survival in various environments. The genomic information for Pectobacterium aroidearum Ec106 can be accessed through the accession number CP166097.1. As a member of the Pectobacterium genus, P. aroidearum is known for its role as a plant pathogen, particularly affecting crops such as potatoes and other aroids. Its Gram-negative nature suggests a complex cell wall structure that may play a role in its virulence and interaction with host plants. The presence of flagella is significant as it may facilitate the bacterium's movement towards plant tissues, enhancing its ability to infect and cause disease. Understanding the traits of Pectobacterium aroidearum Ec106 provides insight into its ecological role as a pathogen. Its motility and genomic characteristics can influence its spread and impact on agricultural systems. The streamlined genomic structure may also suggest an evolutionary adaptation to its specific ecological niche, allowing it to efficiently exploit host plants. This emphasizes the importance of studying such microorganisms in the context of agricultural health and disease management strategies.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusPectobacterium
SpeciesPectobacterium aroidearum
StrainEc106

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pectobacterium aroidearum Ec106, Complete Genome

Gene Summary

Adenine Count

1273407 bp

Thymine Count

1281748 bp

Guanine Count

1367419 bp

Cytosine Count

1358884 bp

Genome Length

5281458 bp

Protein-coding Genes

4528 genes

Non-Coding Genes

231 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methionine abc transporter atp-binding protein metnAB8809_04800Q6D1C4Negative1069871 - 107090237610.6
d-glycero-beta-d-manno-heptose 1,7-bisphosphate 7-phosphataseAB8809_04805Q8ZH37Positive1071084 - 107164720833.8
16s ribosomal rnaNot AvailableNot AvailablePositive1072028 - 1073567Not Available
Trna-gluNot AvailableNot AvailablePositive1073654 - 1073729Not Available
23s ribosomal rnaNot AvailableNot AvailablePositive1073989 - 1076895Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive1077030 - 1077145Not Available
Trna-thrNot AvailableNot AvailablePositive1077164 - 1077239Not Available
5s ribosomal rnaNot AvailableNot AvailablePositive1077278 - 1077393Not Available
mfs transporterAB8809_04840P0AEX3Positive1077714 - 107899446510.4
yfim family lipoproteinAB8809_04845P46126Negative1078991 - 107931411679.7

Displaying genes 1081 – 1090 of 4759 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.