Rhodovulum sulfidophilum W4

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Rhodovulum

Description

Rhodovulum sulfidophilum W4 is a Gram-negative, anaerobic bacterium that thrives in marine environments. This species is notable for its unique metabolic capabilities, specifically its ability to utilize sulfide as an electron donor under anaerobic conditions. This trait is particularly advantageous in marine habitats where sulfide may be present, allowing R. sulfidophilum W4 to occupy a niche that is less accessible to other microorganisms that require oxygen for growth. The genome of R. sulfidophilum W4 is composed of eight replicons, indicating a complex genomic structure that may contribute to its adaptability and survival in varied marine environments. The presence of multiple replicons can enhance the organism's ability to regulate gene expression and respond to environmental changes efficiently. The complete genome of R. sulfidophilum W4 is documented in several accessions (CP015418.1; CP015419.1; CP015420.1; CP015421.1; CP015422.1; DF260912.1; DF260913.1; DF260914.1), which provides valuable resources for further research into its genetics and physiology. Ecologically, R. sulfidophilum W4 plays a significant role in sulfur cycling within marine ecosystems. By utilizing sulfide, it contributes to the breakdown of organic matter and the recycling of nutrients, supporting the overall health and productivity of marine environments. This bacterium exemplifies how specialized microorganisms can influence biogeochemical processes in their habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusRhodovulum
SpeciesRhodovulum sulfidophilum
StrainW4

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodovulum sulfidophilum W4, Complete Genome

Gene Summary

Adenine Count

686156 bp

Thymine Count

687671 bp

Guanine Count

1381996 bp

Cytosine Count

1376763 bp

Genome Length

4132586 bp

Protein-coding Genes

3662 genes

Non-Coding Genes

182 genes

# of Chromosomes/Plasmids

8

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
diguanylate cyclaseA6024_12505P71370Negative2639116 - 264076861301.0
arac family transcriptional regulatorA6024_12510P54722Negative2641028 - 264181628764.6
trna (adenosine(37)-n6)-dimethylallyltransferase miaaA6024_12515A3PJF5Negative2641920 - 264284333152.4
ump kinaseA6024_12520A1B965Positive2642886 - 264362326656.2
ribosome recycling factorA6024_12525A8LK37Positive2643678 - 264424421040.2
di-trans,poly-cis-decaprenylcistransferaseA6024_12530Q98MB9Positive2644333 - 264500725424.5
phosphatidate cytidylyltransferaseA6024_12535Q8YHH2Positive2645007 - 264580128172.1
1-deoxy-d-xylulose-5-phosphate reductoisomeraseA6024_12540Q28PJ0Positive2645807 - 264699142099.7
rip metalloprotease rsepA6024_12545Q8UFL7Positive2647028 - 264836546785.5
outer membrane protein assembly factor bamaA6024_12550C6V5K2Positive2648870 - 265109282182.1

Displaying genes 6621 – 6630 of 11947 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.