Rhodovulum sulfidophilum W4

anaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Rhodovulum

Description

Rhodovulum sulfidophilum W4 is a Gram-negative, anaerobic bacterium that thrives in marine environments. This species is notable for its unique metabolic capabilities, specifically its ability to utilize sulfide as an electron donor under anaerobic conditions. This trait is particularly advantageous in marine habitats where sulfide may be present, allowing R. sulfidophilum W4 to occupy a niche that is less accessible to other microorganisms that require oxygen for growth. The genome of R. sulfidophilum W4 is composed of eight replicons, indicating a complex genomic structure that may contribute to its adaptability and survival in varied marine environments. The presence of multiple replicons can enhance the organism's ability to regulate gene expression and respond to environmental changes efficiently. The complete genome of R. sulfidophilum W4 is documented in several accessions (CP015418.1; CP015419.1; CP015420.1; CP015421.1; CP015422.1; DF260912.1; DF260913.1; DF260914.1), which provides valuable resources for further research into its genetics and physiology. Ecologically, R. sulfidophilum W4 plays a significant role in sulfur cycling within marine ecosystems. By utilizing sulfide, it contributes to the breakdown of organic matter and the recycling of nutrients, supporting the overall health and productivity of marine environments. This bacterium exemplifies how specialized microorganisms can influence biogeochemical processes in their habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusRhodovulum
SpeciesRhodovulum sulfidophilum
StrainW4

Profile

Physiology
Gram staining propertiesGram-negative
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatMarine
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodovulum sulfidophilum W4, Complete Genome

Gene Summary

Adenine Count

686156 bp

Thymine Count

687671 bp

Guanine Count

1381996 bp

Cytosine Count

1376763 bp

Genome Length

4132586 bp

Protein-coding Genes

3662 genes

Non-Coding Genes

182 genes

# of Chromosomes/Plasmids

8

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinA6024_02185P27840Negative430626 - 43137526453.9
ribosome-binding factor aA6024_02190A8LL25Negative431359 - 43176615048.9
4-hydroxy-tetrahydrodipicolinate reductaseA6024_02195Q3IYU4Positive431859 - 43266828197.1
hypothetical proteinA6024_02200Not AvailablePositive433094 - 4333248667.67
dihydrodipicolinate reductaseA6024_02205Q8BTE0Negative433485 - 4336826993.05
16s rrna methyltransferaseA6024_02210Q9I7A9Positive433753 - 43504545148.6
heparinaseA6024_02215A0A0H3C3S1Positive435144 - 43693163576.6
bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolaseA6024_02220A8LMD0Positive436936 - 43852556254.3
signal peptidase iiA6024_02225A9W565Positive438529 - 43899916844.9
pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (e2) componentA6024_02230Not AvailablePositive439053 - 43956818632.1

Displaying genes 4661 – 4670 of 11947 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.