Burkholderia glumae MD1, P1-22-1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia glumae MD1, P1-22-1 is a Gram-negative, rod-shaped bacterium characterized as a chemoheterotroph and a facultative anaerobe. This organism is known to exhibit mobility, facilitated by the presence of flagella, which enhances its ability to navigate its environment. It thrives optimally at a temperature of 30°C and is classified as mesophilic, indicating its growth within a moderate temperature range. Burkholderia glumae MD1 is free-living, meaning it does not rely on a host organism for survival, although it has been associated with the rice plant Oryza sativa. The bacterium possesses four replicons, which may contribute to its genetic diversity and adaptability. The ecological role of Burkholderia glumae MD1, particularly in relation to Oryza sativa, suggests a potential influence on rice cultivation and plant health. Given its free-living nature and metabolic capabilities, it may interact with the rice rhizosphere, impacting nutrient cycling and potentially influencing plant growth or health. Understanding these traits is crucial for assessing the bacterium's role in agricultural ecosystems, particularly in rice production, where it may contribute to beneficial or detrimental interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia glumae
StrainMD1, P1-22-1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Burkholderia glumae MD1, P1-22-1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Burkholderia glumae MD1, P1-22-1, Complete Genome

Gene Summary

Adenine Count

581975 bp

Thymine Count

580256 bp

Guanine Count

1250887 bp

Cytosine Count

1246653 bp

Genome Length

3659771 bp

Protein-coding Genes

3092 genes

Non-Coding Genes

252 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methyl-accepting chemotaxis (mcp) signaling domain proteinKS03_3198P02942Positive3498398 - 350011659830.9
hdod domain proteinKS03_3199P14203Positive3500226 - 350145845301.7
dna mismatch repair protein mutsKS03_3200A4JFW7Positive3502164 - 350480095297.7
fkbp-type peptidyl-prolyl cis-trans isomerases 2KS03_3201Not AvailablePositive3504955 - 350603739705.1
fkbp-type peptidyl-prolyl cis-trans isomerase family proteinKS03_3202Q9KNX6Negative3506088 - 350663319962.7
arac-like ligand binding domain proteinKS03_3203P27431Positive3506666 - 350788945755.6
hypothetical proteinKS03_3204Not AvailableNegative3508210 - 35083505721.2
beta-lactamase superfamily domain proteinKS03_3205C0SP91Negative3508499 - 350927226739.7
nlpb/dapx lipofamily proteinKS03_3206Q3SJU7Negative3509277 - 351042241316.7
4-hydroxy-tetrahydrodipicolinate synthaseKS03_3207Q8Y099Negative3510525 - 351142731806.5

Displaying genes 3211 – 3220 of 5952 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.