Burkholderia glumae MD1, P1-22-1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia glumae MD1, P1-22-1 is a Gram-negative, rod-shaped bacterium characterized as a chemoheterotroph and a facultative anaerobe. This organism is known to exhibit mobility, facilitated by the presence of flagella, which enhances its ability to navigate its environment. It thrives optimally at a temperature of 30°C and is classified as mesophilic, indicating its growth within a moderate temperature range. Burkholderia glumae MD1 is free-living, meaning it does not rely on a host organism for survival, although it has been associated with the rice plant Oryza sativa. The bacterium possesses four replicons, which may contribute to its genetic diversity and adaptability. The ecological role of Burkholderia glumae MD1, particularly in relation to Oryza sativa, suggests a potential influence on rice cultivation and plant health. Given its free-living nature and metabolic capabilities, it may interact with the rice rhizosphere, impacting nutrient cycling and potentially influencing plant growth or health. Understanding these traits is crucial for assessing the bacterium's role in agricultural ecosystems, particularly in rice production, where it may contribute to beneficial or detrimental interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia glumae
StrainMD1, P1-22-1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Burkholderia glumae MD1, P1-22-1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature30
Temperature rangeMesophilic
HabitatNot Available
Biotic relationshipFree living
Host(s)Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Burkholderia glumae MD1, P1-22-1, Complete Genome

Gene Summary

Adenine Count

581975 bp

Thymine Count

580256 bp

Guanine Count

1250887 bp

Cytosine Count

1246653 bp

Genome Length

3659771 bp

Protein-coding Genes

3092 genes

Non-Coding Genes

252 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yggt family proteinKS03_1714P64566Negative1866199 - 186676220657.8
nad binding domain of 6-phosphogluconate dehydrogenase family proteinKS03_1715Not AvailableNegative1866839 - 186776831451.1
hypothetical proteinKS03_1716Not AvailablePositive1868196 - 186849810484.8
decarboxylase, ubid family proteinKS03_1717A9AF28Negative1868738 - 187030957753.7
transglycosylase slt domain proteinKS03_1718P27380Positive1870873 - 187199438461.7
cys/met metabolism plp-dependent enzyme family proteinKS03_1719P96847Negative1872092 - 187330343201.1
transcription antitermination factor nusbKS03_1720Q39IR3Negative1873356 - 187379316154.3
6,7-dimethyl-8-ribityllumazine synthaseKS03_1721A3MMR3Negative1873790 - 187430218463.5
3,4-dihydroxy-2-butanone-4-phosphate synthaseKS03_1722Q9JZ77Negative1874368 - 187549540264.5
twin arginine-targeting translocase, tata/e family proteinKS03_1723B2JHX4Negative1875697 - 18759097201.68

Displaying genes 1841 – 1850 of 5952 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.