Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Eubacteriaceae
Genus
Pseudoramibacter
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Eubacteriaceae |
| Genus | Pseudoramibacter |
| Species | Pseudoramibacter alactolyticus |
| Strain | DO-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | root canals |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
570268 bp
Thymine Count
571463 bp
Guanine Count
603097 bp
Cytosine Count
609184 bp
Genome Length
2354012 bp
Protein-coding Genes
2265 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane glutamic endopeptidase | ACRQ5I_00010 | Not Available | Negative | 419 - 1339 | 34523.1 |
| cpbp family intramembrane glutamic endopeptidase | ACRQ5I_00015 | Not Available | Negative | 1340 - 1621 | 10282.1 |
| hypothetical protein | ACRQ5I_00020 | Not Available | Negative | 1578 - 2012 | 16391.7 |
| bacteriocin | ACRQ5I_00025 | Not Available | Negative | 2098 - 2268 | 6437.99 |
| hypothetical protein | ACRQ5I_00030 | Not Available | Negative | 2300 - 2470 | 6625.89 |
| hypothetical protein | ACRQ5I_00035 | Not Available | Negative | 3051 - 3245 | 6825.21 |
| trk system potassium transporter trka | ACRQ5I_00040 | P0CW17 | Positive | 3374 - 4729 | 49576.3 |
| trkh family potassium uptake protein | ACRQ5I_00045 | Q9L6L2 | Positive | 4739 - 6280 | 56774.9 |
| type iii-a crispr-associated carf protein csm6 | ACRQ5I_00050 | P71635 | Negative | 6261 - 7670 | 54742.5 |
| crispr-associated endonuclease cas2 | ACRQ5I_00055 | P9WPJ2 | Negative | 7691 - 8014 | 12129.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
