Vibrio gazogenes PB1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio gazogenes PB1 is characterized by possessing six replicons, which is notable among bacterial species. These replicons contribute to the organism's genetic diversity and adaptability. The genetic information of V. gazogenes PB1 is documented in several accession numbers: CP092587.1, CP092588.1, AP024873.1, AP024874.1, CP151640.1, and CP151641.1. These accessions provide a valuable resource for researchers interested in studying the genetic makeup and potential applications of this microorganism. The presence of multiple replicons in V. gazogenes PB1 may indicate a complex evolutionary history and the potential for horizontal gene transfer, which can enhance its survivability and ecological versatility. This trait is particularly relevant in aquatic environments where Vibrio species are commonly found, often playing critical roles in nutrient cycling and interactions with other microbial communities. Understanding the replicon structure of V. gazogenes PB1 can offer insights into its ecological interactions and potential roles in various ecosystems, especially in marine environments. The genetic adaptability conferred by multiple replicons may allow V. gazogenes PB1 to respond effectively to environmental stresses, contributing to its survival and ecological resilience. Thus, studying this bacterium can enhance our understanding of microbial dynamics in aquatic ecosystems and the factors that influence the diversity and functionality of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio gazogenes
StrainPB1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio gazogenes PB1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio gazogenes PB1, Complete Genome

Gene Summary

Adenine Count

960178 bp

Thymine Count

963175 bp

Guanine Count

794591 bp

Cytosine Count

798329 bp

Genome Length

3516273 bp

Protein-coding Genes

3004 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
efflux rnd transporter periplasmic adaptor subunitMKS89_00920P27303Negative207752 - 20894243606.0
efflux transporter outer membrane subunitMKS89_00925P24126Negative208964 - 21041252941.1
marr family transcriptional regulatorMKS89_00930P0A2T5Negative210409 - 21087317527.4
atp-dependent dna helicase recgMKS89_00935B7UM74Negative211149 - 21322777470.1
bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolaseMKS89_00940Q9KNM2Negative213432 - 21554679732.5
dna-directed rna polymerase subunit omegaMKS89_00945B7VHI0Negative215581 - 21585310014.8
guanylate kinaseMKS89_00950Q9KNM4Negative215950 - 21658823956.4
dicarboxylate/amino acid:cation symporterMKS89_00955O59010Positive217022 - 21830544304.4
7-cyano-7-deazaguanine/7-aminomethyl-7- deazaguanine transporterMKS89_00960P37619Positive218628 - 21929925204.3
cation acetate symporterMKS89_00965P31640Negative219438 - 22114160796.6

Displaying genes 211 – 220 of 12460 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.