Vibrio gazogenes PB1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio gazogenes PB1 is characterized by possessing six replicons, which is notable among bacterial species. These replicons contribute to the organism's genetic diversity and adaptability. The genetic information of V. gazogenes PB1 is documented in several accession numbers: CP092587.1, CP092588.1, AP024873.1, AP024874.1, CP151640.1, and CP151641.1. These accessions provide a valuable resource for researchers interested in studying the genetic makeup and potential applications of this microorganism. The presence of multiple replicons in V. gazogenes PB1 may indicate a complex evolutionary history and the potential for horizontal gene transfer, which can enhance its survivability and ecological versatility. This trait is particularly relevant in aquatic environments where Vibrio species are commonly found, often playing critical roles in nutrient cycling and interactions with other microbial communities. Understanding the replicon structure of V. gazogenes PB1 can offer insights into its ecological interactions and potential roles in various ecosystems, especially in marine environments. The genetic adaptability conferred by multiple replicons may allow V. gazogenes PB1 to respond effectively to environmental stresses, contributing to its survival and ecological resilience. Thus, studying this bacterium can enhance our understanding of microbial dynamics in aquatic ecosystems and the factors that influence the diversity and functionality of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio gazogenes
StrainPB1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio gazogenes PB1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio gazogenes PB1, Complete Genome

Gene Summary

Adenine Count

960178 bp

Thymine Count

963175 bp

Guanine Count

794591 bp

Cytosine Count

798329 bp

Genome Length

3516273 bp

Protein-coding Genes

3004 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
malate synthase aMKS89_03370P08997Positive732422 - 73405961949.2
isocitrate lyaseMKS89_03375P51066Positive734199 - 73550948372.7
cbs domain-containing proteinMKS89_03380P39066Negative735654 - 73611517352.0
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaMKS89_03385Q9KTZ1Positive736341 - 73740239234.8
trna guanosine(34) transglycosylase tgtMKS89_03390Q9KTY9Positive737509 - 73864242962.5
preprotein translocase subunit yajcMKS89_03395P0ADZ9Positive738753 - 73908511853.7
protein translocase subunit secdMKS89_03400E9RGS3Positive739138 - 74096165623.1
protein translocase subunit secfMKS89_03405E9RGS4Positive740993 - 74194034348.2
inositol-1-monophosphataseMKS89_03410Q9KTY5Negative742012 - 74281529134.9
trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmjMKS89_03415Q6D257Positive743014 - 74373626748.3

Displaying genes 701 – 710 of 12460 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.