Vibrio gazogenes PB1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio gazogenes PB1 is characterized by possessing six replicons, which is notable among bacterial species. These replicons contribute to the organism's genetic diversity and adaptability. The genetic information of V. gazogenes PB1 is documented in several accession numbers: CP092587.1, CP092588.1, AP024873.1, AP024874.1, CP151640.1, and CP151641.1. These accessions provide a valuable resource for researchers interested in studying the genetic makeup and potential applications of this microorganism. The presence of multiple replicons in V. gazogenes PB1 may indicate a complex evolutionary history and the potential for horizontal gene transfer, which can enhance its survivability and ecological versatility. This trait is particularly relevant in aquatic environments where Vibrio species are commonly found, often playing critical roles in nutrient cycling and interactions with other microbial communities. Understanding the replicon structure of V. gazogenes PB1 can offer insights into its ecological interactions and potential roles in various ecosystems, especially in marine environments. The genetic adaptability conferred by multiple replicons may allow V. gazogenes PB1 to respond effectively to environmental stresses, contributing to its survival and ecological resilience. Thus, studying this bacterium can enhance our understanding of microbial dynamics in aquatic ecosystems and the factors that influence the diversity and functionality of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio gazogenes
StrainPB1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio gazogenes PB1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio gazogenes PB1, Complete Genome

Gene Summary

Adenine Count

960178 bp

Thymine Count

963175 bp

Guanine Count

794591 bp

Cytosine Count

798329 bp

Genome Length

3516273 bp

Protein-coding Genes

3004 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formyltetrahydrofolate deformylaseMKS89_08720Q46339Negative1952293 - 195315933311.6
sarcosine oxidase subunit gamma family proteinMKS89_08725Q46338Negative1953212 - 195387724174.0
sarcosine oxidase subunit alphaMKS89_08730Q46337Negative1953870 - 1956887110264.0
sarcosine oxidase subunit deltaMKS89_08735Q46336Negative1956899 - 195718911526.6
sarcosine oxidase subunit beta family proteinMKS89_08740P40875Negative1957216 - 195846945739.5
serine hydroxymethyltransferaseMKS89_08745Q48CP3Negative1958501 - 195976645896.8
asparagine--trna ligaseMKS89_08750Q8DAF0Positive1960182 - 196158252453.2
aspartate/tyrosine/aromatic aminotransferaseMKS89_08755P00509Positive1961861 - 196305143019.7
voc family proteinMKS89_08760Not AvailableNegative1963141 - 196352113481.8
eal domain-containing proteinMKS89_08765Q9I310Negative1963676 - 196623498463.3

Displaying genes 1771 – 1780 of 12460 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.