Vibrio gazogenes PB1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio gazogenes PB1 is characterized by possessing six replicons, which is notable among bacterial species. These replicons contribute to the organism's genetic diversity and adaptability. The genetic information of V. gazogenes PB1 is documented in several accession numbers: CP092587.1, CP092588.1, AP024873.1, AP024874.1, CP151640.1, and CP151641.1. These accessions provide a valuable resource for researchers interested in studying the genetic makeup and potential applications of this microorganism. The presence of multiple replicons in V. gazogenes PB1 may indicate a complex evolutionary history and the potential for horizontal gene transfer, which can enhance its survivability and ecological versatility. This trait is particularly relevant in aquatic environments where Vibrio species are commonly found, often playing critical roles in nutrient cycling and interactions with other microbial communities. Understanding the replicon structure of V. gazogenes PB1 can offer insights into its ecological interactions and potential roles in various ecosystems, especially in marine environments. The genetic adaptability conferred by multiple replicons may allow V. gazogenes PB1 to respond effectively to environmental stresses, contributing to its survival and ecological resilience. Thus, studying this bacterium can enhance our understanding of microbial dynamics in aquatic ecosystems and the factors that influence the diversity and functionality of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio gazogenes
StrainPB1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio gazogenes PB1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio gazogenes PB1, Complete Genome

Gene Summary

Adenine Count

960178 bp

Thymine Count

963175 bp

Guanine Count

794591 bp

Cytosine Count

798329 bp

Genome Length

3516273 bp

Protein-coding Genes

3004 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorMKS89_07420Not AvailableNegative1647065 - 164758919486.1
cina family nicotinamide mononucleotide deamidase-related proteinMKS89_07425B1LLK3Positive1647881 - 164910745732.7
hypothetical proteinMKS89_07430Not AvailablePositive1649490 - 164976810285.3
class i ribonucleotide reductase maintenance protein yfaeMKS89_07435P0ABW4Negative1649834 - 165011510235.1
ribonucleotide-diphosphate reductase subunit betaMKS89_07440P37427Negative1650118 - 165125143852.0
ribonucleoside-diphosphate reductase subunit alphaMKS89_07445P43754Negative1651338 - 165362686158.0
bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-o-methyltransferase ubigMKS89_07450A5F1U0Negative1654049 - 165475626681.0
dna topoisomerase (atp-hydrolyzing) subunit aMKS89_07455P37411Positive1655140 - 1657875100880.0
pts fructose transporter subunit iibcMKS89_07460O31645Positive1658287 - 165978952337.4
pts sugar transporter subunit iiaMKS89_07465D4GYE4Positive1659892 - 166038317960.4

Displaying genes 1511 – 1520 of 12460 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.