Vibrio gazogenes PB1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Vibrio

Description

Vibrio gazogenes PB1 is characterized by possessing six replicons, which is notable among bacterial species. These replicons contribute to the organism's genetic diversity and adaptability. The genetic information of V. gazogenes PB1 is documented in several accession numbers: CP092587.1, CP092588.1, AP024873.1, AP024874.1, CP151640.1, and CP151641.1. These accessions provide a valuable resource for researchers interested in studying the genetic makeup and potential applications of this microorganism. The presence of multiple replicons in V. gazogenes PB1 may indicate a complex evolutionary history and the potential for horizontal gene transfer, which can enhance its survivability and ecological versatility. This trait is particularly relevant in aquatic environments where Vibrio species are commonly found, often playing critical roles in nutrient cycling and interactions with other microbial communities. Understanding the replicon structure of V. gazogenes PB1 can offer insights into its ecological interactions and potential roles in various ecosystems, especially in marine environments. The genetic adaptability conferred by multiple replicons may allow V. gazogenes PB1 to respond effectively to environmental stresses, contributing to its survival and ecological resilience. Thus, studying this bacterium can enhance our understanding of microbial dynamics in aquatic ecosystems and the factors that influence the diversity and functionality of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusVibrio
SpeciesVibrio gazogenes
StrainPB1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Vibrio gazogenes PB1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Vibrio gazogenes PB1, Complete Genome

Gene Summary

Adenine Count

960178 bp

Thymine Count

963175 bp

Guanine Count

794591 bp

Cytosine Count

798329 bp

Genome Length

3516273 bp

Protein-coding Genes

3004 genes

Non-Coding Genes

131 genes

# of Chromosomes/Plasmids

6

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
isochorismate synthaseMKS89_06520O07898Negative1444376 - 144555742870.0
2,3-dihydro-2,3-dihydroxybenzoate dehydrogenaseMKS89_06525Q56632Positive1445720 - 144649328326.9
amino acid deaminaseMKS89_06530O82872Negative1446589 - 144780344853.7
iclr family transcriptional regulatorMKS89_06535P76268Negative1447843 - 144859528461.2
rida family proteinMKS89_06540O58584Negative1448658 - 144904114088.8
amino acid abc transporter atp-binding proteinMKS89_06545O30506Negative1449064 - 144983728824.0
amino acid abc transporter permeaseMKS89_06550P42200Negative1449862 - 145052124217.5
amino acid abc transporter permeaseMKS89_06555P0AEQ8Negative1450524 - 145124927055.1
transporter substrate-binding domain-containing proteinMKS89_06560Q0P9X8Negative1451265 - 145211931947.0
laci family transcriptional regulatorMKS89_06565P0ACP6Negative1452696 - 145372437665.2

Displaying genes 1331 – 1340 of 12460 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.